| Package | Description | 
|---|---|
| org.biojava.nbio.ontology | |
| org.biojava.nbio.ontology.io | 
 
Tools for loading and saving ontologies. 
 | 
| Modifier and Type | Method and Description | 
|---|---|
static OntologyFactory | 
OntoTools.getDefaultFactory()  | 
| Modifier and Type | Method and Description | 
|---|---|
Ontology | 
TabDelimParser.parse(BufferedReader in,
     OntologyFactory of)
Parse an ontology from a reader. 
 | 
Ontology | 
GOParser.parseGO(BufferedReader goFile,
       String ontoName,
       String ontoDescription,
       OntologyFactory factory)  | 
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