Uses of Class
org.biojava.nbio.protmod.ProteinModificationImpl.Builder

Packages that use ProteinModificationImpl.Builder

Package	Description
org.biojava.nbio.protmod

Uses of ProteinModificationImpl.Builder in org.biojava.nbio.protmod

Methods in org.biojava.nbio.protmod that return ProteinModificationImpl.Builder

Modifier and Type	Method and Description
ProteinModificationImpl.Builder	ProteinModificationImpl.Builder.addKeyword(String keyword) Add a keyword associate with the PTM.
ProteinModificationImpl.Builder	ProteinModificationImpl.Builder.addKeywords(Collection<String> keywords)
ProteinModificationImpl.Builder	ProteinModificationImpl.Builder.setCategory(ModificationCategory cat)
ProteinModificationImpl.Builder	ProteinModificationImpl.Builder.setCondition(ModificationCondition condition)
ProteinModificationImpl.Builder	ProteinModificationImpl.Builder.setDescription(String description)
ProteinModificationImpl.Builder	ProteinModificationImpl.Builder.setFormula(String formula) Set the residue formula.
ProteinModificationImpl.Builder	ProteinModificationImpl.Builder.setOccurrenceType(ModificationOccurrenceType occType)
ProteinModificationImpl.Builder	ProteinModificationImpl.Builder.setPdbccId(String pdbccId) Set the Protein Data Bank Chemical Component ID.
ProteinModificationImpl.Builder	ProteinModificationImpl.Builder.setPdbccName(String pdbccName) Set the Protein Data Bank Chemical Component name.
ProteinModificationImpl.Builder	ProteinModificationImpl.Builder.setPsimodId(String psimodId) Set the PSI-MOD ID.
ProteinModificationImpl.Builder	ProteinModificationImpl.Builder.setPsimodName(String psimodName) Set the PSI-MOD name.
ProteinModificationImpl.Builder	ProteinModificationImpl.Builder.setResidId(String residId) Set the RESID ID.
ProteinModificationImpl.Builder	ProteinModificationImpl.Builder.setResidName(String residName) Set the RESID name.
ProteinModificationImpl.Builder	ProteinModificationImpl.Builder.setSystematicName(String sysName) Set the systematic name.