org.biojava.nbio.structure.align.pairwise

Class AltAligComparator

java.lang.Object

org.biojava.nbio.structure.align.pairwise.AltAligComparator

All Implemented Interfaces:

Comparator<AlternativeAlignment>

public class AltAligComparator
extends Object
implements Comparator<AlternativeAlignment>

a comparator to sort AlternativeAlignments based on their number of equivalent residues and RMSD.

Author:

Andreas Prlic

Constructor Summary

Constructors

Constructor and Description
AltAligComparator()

Method Summary

Modifier and Type	Method and Description
int	compare(AlternativeAlignment a, AlternativeAlignment b)

Methods inherited from class java.lang.Object

clone, equals, finalize, getClass, hashCode, notify, notifyAll, toString, wait, wait, wait

Methods inherited from interface java.util.Comparator

comparing, comparing, comparingDouble, comparingInt, comparingLong, equals, naturalOrder, nullsFirst, nullsLast, reversed, reverseOrder, thenComparing, thenComparing, thenComparing, thenComparingDouble, thenComparingInt, thenComparingLong

Constructor Detail

AltAligComparator

public AltAligComparator()

Method Detail

compare

public int compare(AlternativeAlignment a,
                   AlternativeAlignment b)

Specified by:

compare in interface Comparator<AlternativeAlignment>