Hierarchy For Package org.biojava.nbio.structure.align.seq

Package Hierarchies:

• All Packages

Class Hierarchy

• java.lang.Object
  • org.biojava.nbio.structure.align.AbstractStructureAlignment (implements org.biojava.nbio.structure.align.StructureAlignment)
    • org.biojava.nbio.structure.align.seq.SmithWaterman3Daligner (implements org.biojava.nbio.structure.align.StructureAlignment)
  • org.biojava.nbio.structure.align.ce.AbstractUserArgumentProcessor (implements org.biojava.nbio.structure.align.ce.UserArgumentProcessor)
    • org.biojava.nbio.structure.align.seq.SmithWatermanUserArgumentProcessor
  • org.biojava.nbio.structure.align.seq.SmithWaterman3DParameters (implements org.biojava.nbio.structure.align.ce.ConfigStrucAligParams)
  • org.biojava.nbio.structure.align.ce.StartupParameters
    • org.biojava.nbio.structure.align.seq.SmithWatermanUserArgumentProcessor.SmithWatermanStartupParams