org.biojava.nbio.structure.align.ce

Interface UserArgumentProcessor

All Known Implementing Classes:

AbstractUserArgumentProcessor, CeCPUserArgumentProcessor, CeSideChainUserArgumentProcessor, CeUserArgumentProcessor, FatCatUserArgumentProcessor, SmithWatermanUserArgumentProcessor

public interface UserArgumentProcessor

Method Summary

Modifier and Type	Method and Description
String	printHelp() Print help about the arguments
void	process(String[] argv) Process user arguments that have been provided from the command line

Method Detail

process

void process(String[] argv)
      throws ConfigurationException

Process user arguments that have been provided from the command line

Parameters:

argv -

Throws:

ConfigurationException

printHelp

String printHelp()

Print help about the arguments

Returns: