org.biojava.nbio.structure.io.mmcif.model

Class ChemCompAtom

java.lang.Object

org.biojava.nbio.structure.io.mmcif.model.ChemCompAtom

All Implemented Interfaces:

Serializable

public class ChemCompAtom
extends Object
implements Serializable

stores these fields: _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.alt_atom_id _chem_comp_atom.type_symbol _chem_comp_atom.charge _chem_comp_atom.pdbx_align _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_leaving_atom_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.model_Cartn_x _chem_comp_atom.model_Cartn_y _chem_comp_atom.model_Cartn_z _chem_comp_atom.pdbx_model_Cartn_x_ideal _chem_comp_atom.pdbx_model_Cartn_y_ideal _chem_comp_atom.pdbx_model_Cartn_z_ideal _chem_comp_atom.pdbx_component_comp_id _chem_comp_atom.pdbx_residue_numbering _chem_comp_atom.pdbx_component_atom_id _chem_comp_atom.pdbx_polymer_type _chem_comp_atom.pdbx_ref_id _chem_comp_atom.pdbx_component_id _chem_comp_atom.pdbx_ordinal

Author:

Andreas Prlic

See Also:

Serialized Form

Constructor Summary

Constructors

Constructor and Description
ChemCompAtom()

Method Summary

Modifier and Type	Method and Description
String	getAlt_atom_id()
String	getAtom_id()
String	getCharge()
String	getComp_id()
String	getModel_Cartn_x()
String	getModel_Cartn_y()
String	getModel_Cartn_z()
String	getPdbx_align()
String	getPdbx_aromatic_flag()
String	getPdbx_component_atom_id()
String	getPdbx_component_comp_id()
String	getPdbx_component_id()
String	getPdbx_leaving_atom_flag()
String	getPdbx_model_Cartn_x_ideal()
String	getPdbx_model_Cartn_y_ideal()
String	getPdbx_model_Cartn_z_ideal()
String	getPdbx_ordinal()
String	getPdbx_polymer_type()
String	getPdbx_ref_id()
String	getPdbx_residue_numbering()
String	getPdbx_stereo_config()
String	getType_symbol()
void	setAlt_atom_id(String alt_atom_id)
void	setAtom_id(String atom_id)
void	setCharge(String charge)
void	setComp_id(String comp_id)
void	setModel_Cartn_x(String model_Cartn_x)
void	setModel_Cartn_y(String model_Cartn_y)
void	setModel_Cartn_z(String model_Cartn_z)
void	setPdbx_align(String pdbx_align)
void	setPdbx_aromatic_flag(String pdbx_aromatic_flag)
void	setPdbx_component_atom_id(String pdbx_component_atom_id)
void	setPdbx_component_comp_id(String pdbx_component_comp_id)
void	setPdbx_component_id(String pdbx_component_id)
void	setPdbx_leaving_atom_flag(String pdbx_leaving_atom_flag)
void	setPdbx_model_Cartn_x_ideal(String pdbx_model_Cartn_x_ideal)
void	setPdbx_model_Cartn_y_ideal(String pdbx_model_Cartn_y_ideal)
void	setPdbx_model_Cartn_z_ideal(String pdbx_model_Cartn_z_ideal)
void	setPdbx_ordinal(String pdbx_ordinal)
void	setPdbx_polymer_type(String pdbx_polymer_type)
void	setPdbx_ref_id(String pdbx_ref_id)
void	setPdbx_residue_numbering(String pdbx_residue_numbering)
void	setPdbx_stereo_config(String pdbx_stereo_config)
void	setType_symbol(String type_symbol)

Methods inherited from class java.lang.Object

clone, equals, finalize, getClass, hashCode, notify, notifyAll, toString, wait, wait, wait

Constructor Detail

ChemCompAtom

public ChemCompAtom()

Method Detail

getComp_id

public String getComp_id()

setComp_id

public void setComp_id(String comp_id)

getAtom_id

public String getAtom_id()

setAtom_id

public void setAtom_id(String atom_id)

getAlt_atom_id

public String getAlt_atom_id()

setAlt_atom_id

public void setAlt_atom_id(String alt_atom_id)

getType_symbol

public String getType_symbol()

setType_symbol

public void setType_symbol(String type_symbol)

getCharge

public String getCharge()

setCharge

public void setCharge(String charge)

getPdbx_align

public String getPdbx_align()

setPdbx_align

public void setPdbx_align(String pdbx_align)

getPdbx_aromatic_flag

public String getPdbx_aromatic_flag()

setPdbx_aromatic_flag

public void setPdbx_aromatic_flag(String pdbx_aromatic_flag)

getPdbx_leaving_atom_flag

public String getPdbx_leaving_atom_flag()

setPdbx_leaving_atom_flag

public void setPdbx_leaving_atom_flag(String pdbx_leaving_atom_flag)

getPdbx_stereo_config

public String getPdbx_stereo_config()

setPdbx_stereo_config

public void setPdbx_stereo_config(String pdbx_stereo_config)

getModel_Cartn_x

public String getModel_Cartn_x()

setModel_Cartn_x

public void setModel_Cartn_x(String model_Cartn_x)

getModel_Cartn_y

public String getModel_Cartn_y()

setModel_Cartn_y

public void setModel_Cartn_y(String model_Cartn_y)

getModel_Cartn_z

public String getModel_Cartn_z()

setModel_Cartn_z

public void setModel_Cartn_z(String model_Cartn_z)

getPdbx_model_Cartn_x_ideal

public String getPdbx_model_Cartn_x_ideal()

setPdbx_model_Cartn_x_ideal

public void setPdbx_model_Cartn_x_ideal(String pdbx_model_Cartn_x_ideal)

getPdbx_model_Cartn_y_ideal

public String getPdbx_model_Cartn_y_ideal()

setPdbx_model_Cartn_y_ideal

public void setPdbx_model_Cartn_y_ideal(String pdbx_model_Cartn_y_ideal)

getPdbx_model_Cartn_z_ideal

public String getPdbx_model_Cartn_z_ideal()

setPdbx_model_Cartn_z_ideal

public void setPdbx_model_Cartn_z_ideal(String pdbx_model_Cartn_z_ideal)

getPdbx_component_comp_id

public String getPdbx_component_comp_id()

setPdbx_component_comp_id

public void setPdbx_component_comp_id(String pdbx_component_comp_id)

getPdbx_residue_numbering

public String getPdbx_residue_numbering()

setPdbx_residue_numbering

public void setPdbx_residue_numbering(String pdbx_residue_numbering)

getPdbx_component_atom_id

public String getPdbx_component_atom_id()

setPdbx_component_atom_id

public void setPdbx_component_atom_id(String pdbx_component_atom_id)

getPdbx_polymer_type

public String getPdbx_polymer_type()

setPdbx_polymer_type

public void setPdbx_polymer_type(String pdbx_polymer_type)

getPdbx_ref_id

public String getPdbx_ref_id()

setPdbx_ref_id

public void setPdbx_ref_id(String pdbx_ref_id)

getPdbx_component_id

public String getPdbx_component_id()

setPdbx_component_id

public void setPdbx_component_id(String pdbx_component_id)

getPdbx_ordinal

public String getPdbx_ordinal()

setPdbx_ordinal

public void setPdbx_ordinal(String pdbx_ordinal)