See: Description
| Class | Description |
|---|---|
| AbstractBean |
a generic class that implements the toString method for a bean
|
| AtomSite | |
| AuditAuthor | |
| Cell | |
| ChemComp |
A definition for a Chemical Component, as maintained by the wwPDB.
|
| ChemCompAtom |
stores these fields:
_chem_comp_atom.comp_id
_chem_comp_atom.atom_id
_chem_comp_atom.alt_atom_id
_chem_comp_atom.type_symbol
_chem_comp_atom.charge
_chem_comp_atom.pdbx_align
_chem_comp_atom.pdbx_aromatic_flag
_chem_comp_atom.pdbx_leaving_atom_flag
_chem_comp_atom.pdbx_stereo_config
_chem_comp_atom.model_Cartn_x
_chem_comp_atom.model_Cartn_y
_chem_comp_atom.model_Cartn_z
_chem_comp_atom.pdbx_model_Cartn_x_ideal
_chem_comp_atom.pdbx_model_Cartn_y_ideal
_chem_comp_atom.pdbx_model_Cartn_z_ideal
_chem_comp_atom.pdbx_component_comp_id
_chem_comp_atom.pdbx_residue_numbering
_chem_comp_atom.pdbx_component_atom_id
_chem_comp_atom.pdbx_polymer_type
_chem_comp_atom.pdbx_ref_id
_chem_comp_atom.pdbx_component_id
_chem_comp_atom.pdbx_ordinal
|
| ChemCompBond | |
| ChemCompDescriptor |
Container object for _pdbx_chem_comp_descriptor
|
| DatabasePDBremark | |
| DatabasePDBrev | |
| DatabasePdbrevRecord | |
| Entity |
A simple class to represent Entity records in mmCif files
|
| EntityPolySeq |
Container for _entity_poly_seq records
|
| EntitySrcGen |
Data items in the ENTITY_SRC_GEN category record details of
the source from which the entity was obtained in cases
where the source was genetically manipulated.
|
| EntitySrcNat |
Data items in the ENTITY_SRC_NAT category record details of
the source from which the entity was obtained in cases
where the entity was isolated directly from a natural tissue.
|
| EntitySrcSyn |
PDBX_ENTITY_SRC_SYN records the details about each chemically
synthesized molecule (entity) in the asymmetric unit.
|
| Exptl | |
| PdbxChemCompDescriptor | |
| PdbxChemCompIdentifier |
_pdbx_chem_comp_identifier.comp_id
_pdbx_chem_comp_identifier.type
_pdbx_chem_comp_identifier.program
_pdbx_chem_comp_identifier.program_version
_pdbx_chem_comp_identifier.identifier
|
| PdbxEntityNonPoly |
A bean for the Pdbx_entity_nonpoly category.
|
| PdbxNonPolyScheme |
A bean for the PDBX_NONPOLY_SCHEME category, which provides residue level nomenclature
mapping for non-polymer entities.
|
| PdbxPolySeqScheme |
A bean for the PDBX_POLY_SEQ_SCHEME category, which provides residue level nomenclature
mapping for polymer entities.
|
| PdbxStructAssembly | |
| PdbxStructAssemblyGen | |
| PdbxStructAssemblyGenXMLContainer | |
| PdbxStructAssemblyXMLContainer | |
| PdbxStructOperList | |
| PdbxStructOperListXMLContainer | |
| Refine | |
| Struct |
a bean to contain the data of the _struct lines
|
| StructAsym |
Contains the data for _struct_asym
|
| StructConn |
A bean that stores data from the mmcif category _struct_conn
|
| StructKeywords | |
| StructNcsOper |
A class containing the _struct_ncs_oper data
|
| StructRef |
A class to containt the _struct_ref field data
|
| StructRefSeq | |
| StructRefSeqDif |
A class to store sequence mismatch annotations
|
| StructSite |
Created by Matt on 11/1/2015.
|
| StructSiteGen |
Created by Matt on 10/31/2015.
|
| Symmetry |
Copyright © 2000–2016 BioJava. All rights reserved.