org.biojava.nbio.structure.io.mmcif.model

Class StructConn

java.lang.Object

org.biojava.nbio.structure.io.mmcif.model.AbstractBean

org.biojava.nbio.structure.io.mmcif.model.StructConn

public class StructConn
extends AbstractBean

A bean that stores data from the mmcif category _struct_conn

Author:

Peter Rose

Constructor Summary

Constructors

Constructor and Description
StructConn()

Method Summary

Modifier and Type	Method and Description
String	getConn_type_id()
String	getDetails()
String	getId()
String	getPdbx_dist_value()
String	getPdbx_leaving_atom_flag()
String	getPdbx_PDB_id()
String	getPdbx_ptnr1_label_alt_id()
String	getPdbx_ptnr1_PDB_ins_code()
String	getPdbx_ptnr1_standard_comp_id()
String	getPdbx_ptnr2_label_alt_id()
String	getPdbx_ptnr2_PDB_ins_code()
String	getPdbx_ptnr3_label_alt_id()
String	getPdbx_ptnr3_label_asym_id()
String	getPdbx_ptnr3_label_atom_id()
String	getPdbx_ptnr3_label_comp_id()
String	getPdbx_ptnr3_label_seq_id()
String	getPdbx_ptnr3_PDB_ins_code()
String	getPdbx_value_order()
String	getPtnr1_auth_asym_id()
String	getPtnr1_auth_comp_id()
String	getPtnr1_auth_seq_id()
String	getPtnr1_label_asym_id()
String	getPtnr1_label_atom_id()
String	getPtnr1_label_comp_id()
String	getPtnr1_label_seq_id()
String	getPtnr1_symmetry()
String	getPtnr2_auth_asym_id()
String	getPtnr2_auth_comp_id()
String	getPtnr2_auth_seq_id()
String	getPtnr2_label_asym_id()
String	getPtnr2_label_atom_id()
String	getPtnr2_label_comp_id()
String	getPtnr2_label_seq_id()
String	getPtnr2_symmetry()
void	setConn_type_id(String conn_type_id)
void	setDetails(String details)
void	setId(String id)
void	setPdbx_dist_value(String pdbx_dist_value)
void	setPdbx_leaving_atom_flag(String pdbx_leaving_atom_flag)
void	setPdbx_PDB_id(String pdbx_PDB_id)
void	setPdbx_ptnr1_label_alt_id(String pdbx_ptnr1_label_alt_id)
void	setPdbx_ptnr1_PDB_ins_code(String pdbx_ptnr1_PDB_ins_code)
void	setPdbx_ptnr1_standard_comp_id(String pdbx_ptnr1_standard_comp_id)
void	setPdbx_ptnr2_label_alt_id(String pdbx_ptnr2_label_alt_id)
void	setPdbx_ptnr2_PDB_ins_code(String pdbx_ptnr2_PDB_ins_code)
void	setPdbx_ptnr3_label_alt_id(String pdbx_ptnr3_label_alt_id)
void	setPdbx_ptnr3_label_asym_id(String pdbx_ptnr3_label_asym_id)
void	setPdbx_ptnr3_label_atom_id(String pdbx_ptnr3_label_atom_id)
void	setPdbx_ptnr3_label_comp_id(String pdbx_ptnr3_label_comp_id)
void	setPdbx_ptnr3_label_seq_id(String pdbx_ptnr3_label_seq_id)
void	setPdbx_ptnr3_PDB_ins_code(String pdbx_ptnr3_PDB_ins_code)
void	setPdbx_value_order(String pdbx_value_order)
void	setPtnr1_auth_asym_id(String ptnr1_auth_asym_id)
void	setPtnr1_auth_comp_id(String ptnr1_auth_comp_id)
void	setPtnr1_auth_seq_id(String ptnr1_auth_seq_id)
void	setPtnr1_label_asym_id(String ptnr1_label_asym_id)
void	setPtnr1_label_atom_id(String ptnr1_label_atom_id)
void	setPtnr1_label_comp_id(String ptnr1_label_comp_id)
void	setPtnr1_label_seq_id(String ptnr1_label_seq_id)
void	setPtnr1_symmetry(String ptnr1_symmetry)
void	setPtnr2_auth_asym_id(String ptnr2_auth_asym_id)
void	setPtnr2_auth_comp_id(String ptnr2_auth_comp_id)
void	setPtnr2_auth_seq_id(String ptnr2_auth_seq_id)
void	setPtnr2_label_asym_id(String ptnr2_label_asym_id)
void	setPtnr2_label_atom_id(String ptnr2_label_atom_id)
void	setPtnr2_label_comp_id(String ptnr2_label_comp_id)
void	setPtnr2_label_seq_id(String ptnr2_label_seq_id)
void	setPtnr2_symmetry(String ptnr2_symmetry)

Methods inherited from class org.biojava.nbio.structure.io.mmcif.model.AbstractBean

toString

Methods inherited from class java.lang.Object

clone, equals, finalize, getClass, hashCode, notify, notifyAll, wait, wait, wait

Constructor Detail

StructConn

public StructConn()

Method Detail

getId

public String getId()

Returns:

the id

setId

public void setId(String id)

Parameters:

id - the id to set

getConn_type_id

public String getConn_type_id()

Returns:

the conn_type_id

setConn_type_id

public void setConn_type_id(String conn_type_id)

Parameters:

conn_type_id - the conn_type_id to set

getPdbx_PDB_id

public String getPdbx_PDB_id()

Returns:

the pdbx_PDB_id

setPdbx_PDB_id

public void setPdbx_PDB_id(String pdbx_PDB_id)

Parameters:

pdbx_PDB_id - the pdbx_PDB_id to set

getPtnr1_label_asym_id

public String getPtnr1_label_asym_id()

Returns:

the ptnr1_label_asym_id

setPtnr1_label_asym_id

public void setPtnr1_label_asym_id(String ptnr1_label_asym_id)

Parameters:

ptnr1_label_asym_id - the ptnr1_label_asym_id to set

getPtnr1_label_comp_id

public String getPtnr1_label_comp_id()

Returns:

the ptnr1_label_comp_id

setPtnr1_label_comp_id

public void setPtnr1_label_comp_id(String ptnr1_label_comp_id)

Parameters:

ptnr1_label_comp_id - the ptnr1_label_comp_id to set

getPtnr1_label_seq_id

public String getPtnr1_label_seq_id()

Returns:

the ptnr1_label_seq_id

setPtnr1_label_seq_id

public void setPtnr1_label_seq_id(String ptnr1_label_seq_id)

Parameters:

ptnr1_label_seq_id - the ptnr1_label_seq_id to set

getPtnr1_label_atom_id

public String getPtnr1_label_atom_id()

Returns:

the ptnr1_label_atom_id

setPtnr1_label_atom_id

public void setPtnr1_label_atom_id(String ptnr1_label_atom_id)

Parameters:

ptnr1_label_atom_id - the ptnr1_label_atom_id to set

getPdbx_ptnr1_label_alt_id

public String getPdbx_ptnr1_label_alt_id()

Returns:

the pdbx_ptnr1_label_alt_id

setPdbx_ptnr1_label_alt_id

public void setPdbx_ptnr1_label_alt_id(String pdbx_ptnr1_label_alt_id)

Parameters:

pdbx_ptnr1_label_alt_id - the pdbx_ptnr1_label_alt_id to set

getPdbx_ptnr1_PDB_ins_code

public String getPdbx_ptnr1_PDB_ins_code()

Returns:

the pdbx_ptnr1_PDB_ins_code

setPdbx_ptnr1_PDB_ins_code

public void setPdbx_ptnr1_PDB_ins_code(String pdbx_ptnr1_PDB_ins_code)

Parameters:

pdbx_ptnr1_PDB_ins_code - the pdbx_ptnr1_PDB_ins_code to set

getPdbx_ptnr1_standard_comp_id

public String getPdbx_ptnr1_standard_comp_id()

Returns:

the pdbx_ptnr1_standard_comp_id

setPdbx_ptnr1_standard_comp_id

public void setPdbx_ptnr1_standard_comp_id(String pdbx_ptnr1_standard_comp_id)

Parameters:

pdbx_ptnr1_standard_comp_id - the pdbx_ptnr1_standard_comp_id to set

getPtnr1_symmetry

public String getPtnr1_symmetry()

Returns:

the ptnr1_symmetry

setPtnr1_symmetry

public void setPtnr1_symmetry(String ptnr1_symmetry)

Parameters:

ptnr1_symmetry - the ptnr1_symmetry to set

getPtnr2_label_asym_id

public String getPtnr2_label_asym_id()

Returns:

the ptnr2_label_asym_id

setPtnr2_label_asym_id

public void setPtnr2_label_asym_id(String ptnr2_label_asym_id)

Parameters:

ptnr2_label_asym_id - the ptnr2_label_asym_id to set

getPtnr2_label_comp_id

public String getPtnr2_label_comp_id()

Returns:

the ptnr2_label_comp_id

setPtnr2_label_comp_id

public void setPtnr2_label_comp_id(String ptnr2_label_comp_id)

Parameters:

ptnr2_label_comp_id - the ptnr2_label_comp_id to set

getPtnr2_label_seq_id

public String getPtnr2_label_seq_id()

Returns:

the ptnr2_label_seq_id

setPtnr2_label_seq_id

public void setPtnr2_label_seq_id(String ptnr2_label_seq_id)

Parameters:

ptnr2_label_seq_id - the ptnr2_label_seq_id to set

getPtnr2_label_atom_id

public String getPtnr2_label_atom_id()

Returns:

the ptnr2_label_atom_id

setPtnr2_label_atom_id

public void setPtnr2_label_atom_id(String ptnr2_label_atom_id)

Parameters:

ptnr2_label_atom_id - the ptnr2_label_atom_id to set

getPdbx_ptnr2_label_alt_id

public String getPdbx_ptnr2_label_alt_id()

Returns:

the pdbx_ptnr2_label_alt_id

setPdbx_ptnr2_label_alt_id

public void setPdbx_ptnr2_label_alt_id(String pdbx_ptnr2_label_alt_id)

Parameters:

pdbx_ptnr2_label_alt_id - the pdbx_ptnr2_label_alt_id to set

getPdbx_ptnr2_PDB_ins_code

public String getPdbx_ptnr2_PDB_ins_code()

Returns:

the pdbx_ptnr2_PDB_ins_code

setPdbx_ptnr2_PDB_ins_code

public void setPdbx_ptnr2_PDB_ins_code(String pdbx_ptnr2_PDB_ins_code)

Parameters:

pdbx_ptnr2_PDB_ins_code - the pdbx_ptnr2_PDB_ins_code to set

getPtnr1_auth_asym_id

public String getPtnr1_auth_asym_id()

Returns:

the ptnr1_auth_asym_id

setPtnr1_auth_asym_id

public void setPtnr1_auth_asym_id(String ptnr1_auth_asym_id)

Parameters:

ptnr1_auth_asym_id - the ptnr1_auth_asym_id to set

getPtnr1_auth_comp_id

public String getPtnr1_auth_comp_id()

Returns:

the ptnr1_auth_comp_id

setPtnr1_auth_comp_id

public void setPtnr1_auth_comp_id(String ptnr1_auth_comp_id)

Parameters:

ptnr1_auth_comp_id - the ptnr1_auth_comp_id to set

getPtnr1_auth_seq_id

public String getPtnr1_auth_seq_id()

Returns:

the ptnr1_auth_seq_id

setPtnr1_auth_seq_id

public void setPtnr1_auth_seq_id(String ptnr1_auth_seq_id)

Parameters:

ptnr1_auth_seq_id - the ptnr1_auth_seq_id to set

getPtnr2_auth_asym_id

public String getPtnr2_auth_asym_id()

Returns:

the ptnr2_auth_asym_id

setPtnr2_auth_asym_id

public void setPtnr2_auth_asym_id(String ptnr2_auth_asym_id)

Parameters:

ptnr2_auth_asym_id - the ptnr2_auth_asym_id to set

getPtnr2_auth_comp_id

public String getPtnr2_auth_comp_id()

Returns:

the ptnr2_auth_comp_id

setPtnr2_auth_comp_id

public void setPtnr2_auth_comp_id(String ptnr2_auth_comp_id)

Parameters:

ptnr2_auth_comp_id - the ptnr2_auth_comp_id to set

getPtnr2_auth_seq_id

public String getPtnr2_auth_seq_id()

Returns:

the ptnr2_auth_seq_id

setPtnr2_auth_seq_id

public void setPtnr2_auth_seq_id(String ptnr2_auth_seq_id)

Parameters:

ptnr2_auth_seq_id - the ptnr2_auth_seq_id to set

getPtnr2_symmetry

public String getPtnr2_symmetry()

Returns:

the ptnr2_symmetry

setPtnr2_symmetry

public void setPtnr2_symmetry(String ptnr2_symmetry)

Parameters:

ptnr2_symmetry - the ptnr2_symmetry to set

getPdbx_ptnr3_label_atom_id

public String getPdbx_ptnr3_label_atom_id()

Returns:

the pdbx_ptnr3_label_atom_id

setPdbx_ptnr3_label_atom_id

public void setPdbx_ptnr3_label_atom_id(String pdbx_ptnr3_label_atom_id)

Parameters:

pdbx_ptnr3_label_atom_id - the pdbx_ptnr3_label_atom_id to set

getPdbx_ptnr3_label_seq_id

public String getPdbx_ptnr3_label_seq_id()

Returns:

the pdbx_ptnr3_label_seq_id

setPdbx_ptnr3_label_seq_id

public void setPdbx_ptnr3_label_seq_id(String pdbx_ptnr3_label_seq_id)

Parameters:

pdbx_ptnr3_label_seq_id - the pdbx_ptnr3_label_seq_id to set

getPdbx_ptnr3_label_comp_id

public String getPdbx_ptnr3_label_comp_id()

Returns:

the pdbx_ptnr3_label_comp_id

setPdbx_ptnr3_label_comp_id

public void setPdbx_ptnr3_label_comp_id(String pdbx_ptnr3_label_comp_id)

Parameters:

pdbx_ptnr3_label_comp_id - the pdbx_ptnr3_label_comp_id to set

getPdbx_ptnr3_label_asym_id

public String getPdbx_ptnr3_label_asym_id()

Returns:

the pdbx_ptnr3_label_asym_id

setPdbx_ptnr3_label_asym_id

public void setPdbx_ptnr3_label_asym_id(String pdbx_ptnr3_label_asym_id)

Parameters:

pdbx_ptnr3_label_asym_id - the pdbx_ptnr3_label_asym_id to set

getPdbx_ptnr3_label_alt_id

public String getPdbx_ptnr3_label_alt_id()

Returns:

the pdbx_ptnr3_label_alt_id

setPdbx_ptnr3_label_alt_id

public void setPdbx_ptnr3_label_alt_id(String pdbx_ptnr3_label_alt_id)

Parameters:

pdbx_ptnr3_label_alt_id - the pdbx_ptnr3_label_alt_id to set

getPdbx_ptnr3_PDB_ins_code

public String getPdbx_ptnr3_PDB_ins_code()

Returns:

the pdbx_ptnr3_PDB_ins_code

setPdbx_ptnr3_PDB_ins_code

public void setPdbx_ptnr3_PDB_ins_code(String pdbx_ptnr3_PDB_ins_code)

Parameters:

pdbx_ptnr3_PDB_ins_code - the pdbx_ptnr3_PDB_ins_code to set

getDetails

public String getDetails()

Returns:

the details

setDetails

public void setDetails(String details)

Parameters:

details - the details to set

getPdbx_dist_value

public String getPdbx_dist_value()

Returns:

the pdbx_dist_value

setPdbx_dist_value

public void setPdbx_dist_value(String pdbx_dist_value)

Parameters:

pdbx_dist_value - the pdbx_dist_value to set

getPdbx_value_order

public String getPdbx_value_order()

Returns:

the pdbx_value_order

setPdbx_value_order

public void setPdbx_value_order(String pdbx_value_order)

Parameters:

pdbx_value_order - the pdbx_value_order to set

getPdbx_leaving_atom_flag

public String getPdbx_leaving_atom_flag()

setPdbx_leaving_atom_flag

public void setPdbx_leaving_atom_flag(String pdbx_leaving_atom_flag)