org.biojava.nbio.structure.symmetry.geometry

Class SuperPositionQCP

java.lang.Object

org.biojava.nbio.structure.symmetry.geometry.SuperPositionQCP

public final class SuperPositionQCP
extends Object

Author:

Peter

Constructor Summary

Constructors

Constructor and Description
SuperPositionQCP()

Method Summary

Modifier and Type	Method and Description
double	getRmsd()
javax.vecmath.Matrix3d	getRotationMatrix()
javax.vecmath.Matrix4d	getTransformationMatrix()
javax.vecmath.Point3d[]	getTransformedCoordinates()
void	set(javax.vecmath.Point3d[] x, javax.vecmath.Point3d[] y)
void	set(javax.vecmath.Point3d[] x, javax.vecmath.Point3d[] y, double[] weight)
void	setCentered(boolean centered)

Methods inherited from class java.lang.Object

clone, equals, finalize, getClass, hashCode, notify, notifyAll, toString, wait, wait, wait

Constructor Detail

SuperPositionQCP

public SuperPositionQCP()

Method Detail

set

public void set(javax.vecmath.Point3d[] x,
                javax.vecmath.Point3d[] y)

set

public void set(javax.vecmath.Point3d[] x,
                javax.vecmath.Point3d[] y,
                double[] weight)

setCentered

public void setCentered(boolean centered)

getRmsd

public double getRmsd()

getTransformationMatrix

public javax.vecmath.Matrix4d getTransformationMatrix()

getRotationMatrix

public javax.vecmath.Matrix3d getRotationMatrix()

getTransformedCoordinates

public javax.vecmath.Point3d[] getTransformedCoordinates()