org.biojava.nbio.core.sequence.transcription

Class Table.CaseInsensitiveTriplet

java.lang.Object

org.biojava.nbio.core.sequence.transcription.Table.CaseInsensitiveTriplet

Enclosing interface:

Table

public static class Table.CaseInsensitiveTriplet
extends Object

Class used to hold three nucleotides together and allow for equality to be assessed in a case insensitive manner.

Constructor Summary

Constructors

Constructor and Description
CaseInsensitiveTriplet(NucleotideCompound one, NucleotideCompound two, NucleotideCompound three)

Method Summary

Modifier and Type	Method and Description
int	compoundToInt(NucleotideCompound c)
boolean	equals(Object obj)
NucleotideCompound	getOne()
NucleotideCompound	getThree()
NucleotideCompound	getTwo()
int	hashCode()
int	intValue() Attempts to provide an int version of this codon which multiplies each position by
String	toString()

Methods inherited from class java.lang.Object

clone, finalize, getClass, notify, notifyAll, wait, wait, wait

Constructor Detail

CaseInsensitiveTriplet

public CaseInsensitiveTriplet(NucleotideCompound one,
                              NucleotideCompound two,
                              NucleotideCompound three)

Method Detail

getOne

public NucleotideCompound getOne()

getTwo

public NucleotideCompound getTwo()

getThree

public NucleotideCompound getThree()

equals

public boolean equals(Object obj)

Overrides:

equals in class Object

hashCode

public int hashCode()

Overrides:

hashCode in class Object

toString

public String toString()

Overrides:

toString in class Object

intValue

public int intValue()

Attempts to provide an int version of this codon which multiplies each position by

compoundToInt

public int compoundToInt(NucleotideCompound c)