Package org.biojava.nbio.core.sequence.views

Class Summary

Class	Description
ComplementSequenceView<C extends ComplementCompound>	For a given sequence this class will create a view over the top of it and for every request the code will return the complement of the underlying base e.g. base A will become base T
ReversedSequenceView<C extends Compound>	For a given sequence this class will return the base at the reversed position i.e. in a sequence of size 10, if you request base 2 you will get back the base at position 9.
RnaSequenceView	Attempts to do on the fly translation of RNA by not requesting the compounds until asked.
WindowedSequence<C extends Compound>	A sliding window view of a sequence which does not implement any interfaces like Sequence because they do not fit how this works.