Uses of Class
org.biojava.nbio.structure.scop.ScopNode

Packages that use ScopNode

Package	Description
org.biojava.nbio.structure.scop	Parsers and API for SCOP, Structural Classification of Proteins.
org.biojava.nbio.structure.scop.server

Uses of ScopNode in org.biojava.nbio.structure.scop

Methods in org.biojava.nbio.structure.scop that return ScopNode

Modifier and Type	Method and Description
ScopNode	RemoteScopInstallation.getScopNode(int sunid)
ScopNode	ScopDatabase.getScopNode(int sunid) Access a particular ScopNode.
ScopNode	ScopInstallation.getScopNode(int sunid)
ScopNode	CachedRemoteScopInstallation.getScopNode(int sunid)

Methods in org.biojava.nbio.structure.scop that return types with arguments of type ScopNode

Modifier and Type	Method and Description
List<ScopNode>	RemoteScopInstallation.getTree(ScopDomain domain)
List<ScopNode>	ScopDatabase.getTree(ScopDomain domain) get the SCOP sub-tree for a particular domain.
List<ScopNode>	ScopInstallation.getTree(ScopDomain domain)
List<ScopNode>	CachedRemoteScopInstallation.getTree(ScopDomain domain)

Uses of ScopNode in org.biojava.nbio.structure.scop.server

Methods in org.biojava.nbio.structure.scop.server that return ScopNode

Modifier and Type	Method and Description
static ScopNode	XMLUtil.getScopNodeFromXML(String xml)

Methods in org.biojava.nbio.structure.scop.server that return types with arguments of type ScopNode

Modifier and Type	Method and Description
List<ScopNode>	ScopNodes.getScopNode()

Methods in org.biojava.nbio.structure.scop.server with parameters of type ScopNode

Modifier and Type	Method and Description
static String	XMLUtil.getScopNodeXML(ScopNode scopNode)

Method parameters in org.biojava.nbio.structure.scop.server with type arguments of type ScopNode

Modifier and Type	Method and Description
static String	XMLUtil.getScopNodesXML(List<ScopNode> nodes)
void	ScopNodes.setScopNode(List<ScopNode> scopNodes)