Uses of Package
org.biojava.bio.program.gff

Packages that use org.biojava.bio.program.gff

Package	Description
org.biojava.bio.program.gff	GFF manipulation.
org.biojava.bio.program.gff3	Support for reading and writing GFF3.
org.biojava.bio.seq.distributed	Sequences and SequenceDBs which are composed from data taken from a number of data sources.

Classes in org.biojava.bio.program.gff used by org.biojava.bio.program.gff

Class and Description
GFFDocumentHandler The interface for things that listen to GFF event streams.
GFFEntrySet A set of entries and comments as a representation of a GFF file.
GFFErrorHandler Interface which captures any errors which occur when parsing a GFF stream.
GFFRecord A single GFF record.
GFFRecordFilter A filter that will accept or reject a GFFEntry.
IgnoreRecordException Ignore this record in the stream.
SimpleGFFRecord A no-frills implementation of a GFFRecord.

Classes in org.biojava.bio.program.gff used by org.biojava.bio.program.gff3

Class and Description
GFFErrorHandler Interface which captures any errors which occur when parsing a GFF stream.
IgnoreRecordException Ignore this record in the stream.

Classes in org.biojava.bio.program.gff used by org.biojava.bio.seq.distributed

Class and Description
GFFEntrySet A set of entries and comments as a representation of a GFF file.