Uses of Class
org.biojava.bio.seq.io.agave.AGAVEDbId

Packages that use AGAVEDbId

Package	Description
org.biojava.bio.seq.io.agave	Classes for converting between AGAVE XML and BioJava objects.

Uses of AGAVEDbId in org.biojava.bio.seq.io.agave

Methods in org.biojava.bio.seq.io.agave that return AGAVEDbId

Modifier and Type	Method and Description
AGAVEDbId[]	SimpleAnnotFilter.getAltIds(Annotation annot)
AGAVEDbId[]	AGAVEAnnotFilter.getAltIds(Annotation annot)
AGAVEDbId[]	Agave2AgaveAnnotFilter.getAltIds(Annotation annot)
AGAVEDbId	AGAVEXref.getDbId()
AGAVEDbId	AGAVEQueryRegion.getDbId()
AGAVEDbId	AGAVEMatchRegion.getDbId()
AGAVEDbId	SimpleAnnotFilter.getDbId(Annotation annot)
AGAVEDbId	Embl2AgaveAnnotFilter.getDbId(Annotation annot)
AGAVEDbId	AGAVEAnnotFilter.getDbId(Annotation annot)
AGAVEDbId	Agave2AgaveAnnotFilter.getDbId(Annotation annot)

Methods in org.biojava.bio.seq.io.agave with parameters of type AGAVEDbId

Modifier and Type	Method and Description
void	AGAVEXrefsPropHandler.addDbId(AGAVEDbId db_id)
void	AGAVEXrefs.addDbId(AGAVEDbId id) add @param id
void	AGAVEXrefPropHandler.addDbId(AGAVEDbId db_id)
void	AGAVEQueryRegionPropHandler.addDbId(AGAVEDbId db_id)
void	AGAVEMatchRegionPropHandler.addDbId(AGAVEDbId id)
void	AGAVEMapPositionPropHandler.addDbId(AGAVEDbId db_id)
void	AGAVEMapPosition.addDbId(AGAVEDbId id)
void	AGAVEDbIdCallbackItf.addDbId(AGAVEDbId db_id)
void	AGAVEAltIdsPropHandler.addDbId(AGAVEDbId db_id)
void	AGAVEXref.setDbId(AGAVEDbId id)
void	AGAVEQueryRegion.setDbId(AGAVEDbId id)
void	AGAVEMatchRegion.setDbId(AGAVEDbId id)