Uses of Class
org.biojava.utils.ChangeSupport

Packages that use ChangeSupport

Package	Description
org.biojava.bio	The core classes that will be used throughout the bio packages.
org.biojava.bio.dist	Probability distributions over Alphabets.
org.biojava.bio.dp	HMM and Dynamic Programming Algorithms.
org.biojava.bio.gui.sequence	Graphical displays of biological sequences and associated annotations.
org.biojava.bio.search	Interfaces and classes for representing sequence similarity search results.
org.biojava.bio.seq	Classes and interfaces for defining biological sequences and informatics objects.
org.biojava.bio.seq.db	Collections of biological sequence data.
org.biojava.bio.seq.distributed	Sequences and SequenceDBs which are composed from data taken from a number of data sources.
org.biojava.bio.seq.impl	Standard in-memory implementations of Sequence and Feature.
org.biojava.bio.symbol	Representation of the Symbols that make up a sequence, and locations within them.
org.biojava.bio.taxa	Taxonomy object for representing species information.
org.biojava.ontology	A general-purpose API for ontologies.
org.biojava.utils	Miscellaneous utility classes used by other BioJava components.

Uses of ChangeSupport in org.biojava.bio

Methods in org.biojava.bio that return ChangeSupport

Modifier and Type	Method and Description
protected ChangeSupport	OverlayAnnotation.getChangeSupport(ChangeType changeType)
protected ChangeSupport	MergeAnnotation.getChangeSupport(ChangeType changeType)

Constructors in org.biojava.bio with parameters of type ChangeSupport

Constructor and Description
Annotatable.AnnotationForwarder(Object source, ChangeSupport cs) Deprecated. Create a new AnnotationForwarder that will forward events for a source using a change support.
MergeAnnotation.PropertyForwarder(Object source, ChangeSupport cs) Create a new forwarder on behalf of a source using the change support.
OverlayAnnotation.PropertyForwarder(Object source, ChangeSupport cs) Forward on behalf of source using the change support provided.

Uses of ChangeSupport in org.biojava.bio.dist

Methods in org.biojava.bio.dist that return ChangeSupport

Modifier and Type	Method and Description
protected ChangeSupport	TranslatedDistribution.getChangeSupport(ChangeType ct)
protected ChangeSupport	AbstractOrderNDistribution.getChangeSupport(ChangeType ct)
protected ChangeSupport	AbstractDistribution.getChangeSupport(ChangeType ct)

Constructors in org.biojava.bio.dist with parameters of type ChangeSupport

Constructor and Description
Distribution.NullModelForwarder(Object source, ChangeSupport cs) Deprecated. Create a new forwarder.

Uses of ChangeSupport in org.biojava.bio.dp

Methods in org.biojava.bio.dp that return ChangeSupport

Modifier and Type	Method and Description
protected ChangeSupport	SimpleMarkovModel.getChangeSupport(ChangeType ct)
protected ChangeSupport	SimpleEmissionState.getChangeSupport(ChangeType ct)

Uses of ChangeSupport in org.biojava.bio.gui.sequence

Methods in org.biojava.bio.gui.sequence that return ChangeSupport

Modifier and Type	Method and Description
protected ChangeSupport	LabelledSequenceRenderer.generateChangeSupport()
protected ChangeSupport	TranslatedSequencePanel.getChangeSupport(ChangeType ct) getChangeSupport lazily instantiates a helper for change listeners.
protected ChangeSupport	SequenceRendererWrapper.getChangeSupport(ChangeType ct)
protected ChangeSupport	SequencePoster.getChangeSupport(ChangeType ct) Deprecated.
protected ChangeSupport	SequencePanel.getChangeSupport(ChangeType ct)
protected ChangeSupport	PairwiseSequencePanel.getChangeSupport(ChangeType ct) getChangeSupport lazily instantiates a helper for change listeners.
protected ChangeSupport	PairwiseOverlayRenderer.getChangeSupport(ChangeType ct)
protected ChangeSupport	PairwiseFilteringRenderer.getChangeSupport(ChangeType ct)
protected ChangeSupport	PaddingRenderer.getChangeSupport(ChangeType ct)
protected ChangeSupport	OverlayRendererWrapper.getChangeSupport(ChangeType ct)
protected ChangeSupport	MultiLineRenderer.getChangeSupport(ChangeType ct)
protected ChangeSupport	FilteringRenderer.getChangeSupport(ChangeType ct)
protected ChangeSupport	FeatureBlockSequenceRenderer.getChangeSupport(ChangeType ct)
protected ChangeSupport	BumpedRenderer.getChangeSupport(ChangeType ct)

Constructors in org.biojava.bio.gui.sequence with parameters of type ChangeSupport

Constructor and Description
PairwiseSequenceRenderer.PairwiseRendererForwarder(PairwiseSequenceRenderer source, ChangeSupport cs) Creates a new PairwiseRendererForwarder.
SequenceRenderer.RendererForwarder(SequenceRenderer source, ChangeSupport cs)

Uses of ChangeSupport in org.biojava.bio.search

Methods in org.biojava.bio.search that return ChangeSupport

Modifier and Type	Method and Description
protected ChangeSupport	SimpleSeqSimilaritySearchSubHit.getChangeSupport(ChangeType ct)
protected ChangeSupport	SimpleSeqSimilaritySearchResult.getChangeSupport(ChangeType ct)
protected ChangeSupport	SimpleSeqSimilaritySearchHit.getChangeSupport(ChangeType ct)
protected ChangeSupport	SequenceDBSearchSubHit.getChangeSupport(ChangeType ct) Deprecated.
protected ChangeSupport	SequenceDBSearchResult.getChangeSupport(ChangeType ct) Deprecated.
protected ChangeSupport	SequenceDBSearchHit.getChangeSupport(ChangeType ct) Deprecated.

Uses of ChangeSupport in org.biojava.bio.seq

Methods in org.biojava.bio.seq that return ChangeSupport

Modifier and Type	Method and Description
protected ChangeSupport	SimpleAssembly.getChangeSupport(ChangeType ct)
protected ChangeSupport	NewSimpleAssembly.getChangeSupport(ChangeType ct)
protected ChangeSupport	LazyFeatureHolder.getChangeSupport(ChangeType ct)
protected ChangeSupport	FeatureTypes.RepositoryImpl.getChangeSupport(ChangeType ct)

Uses of ChangeSupport in org.biojava.bio.seq.db

Methods in org.biojava.bio.seq.db that return ChangeSupport

Modifier and Type	Method and Description
protected ChangeSupport	SequenceDBWrapper.getChangeSupport(ChangeType ct)

Constructors in org.biojava.bio.seq.db with parameters of type ChangeSupport

Constructor and Description
SequenceDBWrapper.SequencesForwarder(Object source, ChangeSupport cs)

Uses of ChangeSupport in org.biojava.bio.seq.distributed

Methods in org.biojava.bio.seq.distributed that return ChangeSupport

Modifier and Type	Method and Description
protected ChangeSupport	DistributedSequenceDB.getChangeSupport()

Uses of ChangeSupport in org.biojava.bio.seq.impl

Methods in org.biojava.bio.seq.impl that return ChangeSupport

Modifier and Type	Method and Description
protected ChangeSupport	LazyFilterFeatureHolder.getChangeSupport()
protected ChangeSupport	SimpleSequence.getChangeSupport(ChangeType ct)
protected ChangeSupport	SimpleFeature.getChangeSupport(ChangeType ct)

Uses of ChangeSupport in org.biojava.bio.symbol

Methods in org.biojava.bio.symbol that return ChangeSupport

Modifier and Type	Method and Description
protected ChangeSupport	SimpleAlphabet.getChangeSupport(ChangeType ct)
protected ChangeSupport	AbstractSymbol.getChangeSupport(ChangeType changeType)

Constructors in org.biojava.bio.symbol with parameters of type ChangeSupport

Constructor and Description
AbstractSymbolList.EditScreener(Object source, ChangeSupport cs, int min, int max)
AbstractSymbolList.EditTranslater(Object source, ChangeSupport cs, int min, int max)

Uses of ChangeSupport in org.biojava.bio.taxa

Methods in org.biojava.bio.taxa that return ChangeSupport

Modifier and Type	Method and Description
protected ChangeSupport	AbstractTaxon.getChangeSupport(ChangeType ct) Deprecated.

Uses of ChangeSupport in org.biojava.ontology

Methods in org.biojava.ontology that return ChangeSupport

Modifier and Type	Method and Description
ChangeSupport	OntologyTerm.Impl.getChangeSupport(ChangeType ct)
ChangeSupport	AbstractTerm.getChangeSupport(ChangeType ct)

Uses of ChangeSupport in org.biojava.utils

Methods in org.biojava.utils that return ChangeSupport

Modifier and Type	Method and Description
ChangeSupport	ChangeForwarder.changeSupport() Return the underlying ChangeSupport instance that can be used to fire ChangeEvents and mannage listeners.
protected ChangeSupport	AbstractChangeable.generateChangeSupport() Called the first time a ChangeSupport object is needed.
protected ChangeSupport	AbstractChangeable.getChangeSupport(ChangeType ct) Called to retrieve the ChangeSupport for this object.

Constructors in org.biojava.utils with parameters of type ChangeSupport

Constructor and Description
ChangeForwarder.Retyper(Object source, ChangeSupport changeSupport, ChangeType type) Create a new Retyper for forwarding events.
ChangeForwarder(Object source, ChangeSupport changeSupport) Create a new ChangeForwarder for forwarding events.