Uses of Package
org.biojava.bio.program.gff
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Packages that use org.biojava.bio.program.gff Package Description org.biojava.bio.program.gff GFF manipulation.org.biojava.bio.program.gff3 Support for reading and writing GFF3.org.biojava.bio.seq.distributed Sequences and SequenceDBs which are composed from data taken from a number of data sources. -
Classes in org.biojava.bio.program.gff used by org.biojava.bio.program.gff Class Description GFFDocumentHandler The interface for things that listen to GFF event streams.GFFEntrySet A set of entries and comments as a representation of a GFF file.GFFErrorHandler Interface which captures any errors which occur when parsing a GFF stream.GFFRecord A single GFF record.GFFRecordFilter A filter that will accept or reject a GFFEntry.IgnoreRecordException Ignore this record in the stream.SimpleGFFRecord A no-frills implementation of a GFFRecord. -
Classes in org.biojava.bio.program.gff used by org.biojava.bio.program.gff3 Class Description GFFErrorHandler Interface which captures any errors which occur when parsing a GFF stream.IgnoreRecordException Ignore this record in the stream. -
Classes in org.biojava.bio.program.gff used by org.biojava.bio.seq.distributed Class Description GFFEntrySet A set of entries and comments as a representation of a GFF file.