- Enclosing interface:
public static final class FeatureFilter.ShadowOverlapsLocation extends Object implements OptimizableFilterA filter that accepts all features whose shadow overlaps a specified
Location. The shadow is defined as the interval between the minimum and maximum positions of the feature's location. For features with contiguous locations, this filter is equivalent to
A typical use of this filter is in graphics code where you are rendering features with non-contiguous locations in a `blocks and connectors' style, and wish to draw the connector even when no blocks fall within the selected field of view
- Thomas Down
- See Also:
- Serialized Form
Nested Class Summary
Nested classes/interfaces inherited from interface org.biojava.bio.seq.FeatureFilter
FeatureFilter.And, FeatureFilter.AnnotationContains, FeatureFilter.ByAncestor, FeatureFilter.ByAnnotation, FeatureFilter.ByAnnotationType, FeatureFilter.ByChild, FeatureFilter.ByClass, FeatureFilter.ByComponentName, FeatureFilter.ByDescendant, FeatureFilter.ByFeature, FeatureFilter.ByPairwiseScore, FeatureFilter.ByParent, FeatureFilter.BySequenceName, FeatureFilter.BySource, FeatureFilter.ByType, FeatureFilter.ContainedByLocation, FeatureFilter.FrameFilter, FeatureFilter.HasAnnotation, FeatureFilter.Not, FeatureFilter.OnlyChildren, FeatureFilter.OnlyDescendants, FeatureFilter.Or, FeatureFilter.OverlapsLocation, FeatureFilter.ShadowContainedByLocation, FeatureFilter.ShadowOverlapsLocation, FeatureFilter.StrandFilter
All Methods Instance Methods Concrete Methods Modifier and Type Method Description
accept(Feature f)Returns true if the feature overlaps this filter's location.
isDisjoint(FeatureFilter filt)Returns true if this filter is disjoint from filt - that is, there is no Feature that is accepted by both filters.
isProperSubset(FeatureFilter sup)Returns true if this filter is a proper subset of sup - that is, for every feature that matches this, it also matches sup.
acceptReturns true if the feature overlaps this filter's location.
public boolean isProperSubset(FeatureFilter sup)Description copied from interface:
OptimizableFilterReturns true if this filter is a proper subset of sup - that is, for every feature that matches this, it also matches sup. The empty filter is a proper subset of all filters. All filters are a proper subset of the all filter. All filters are proper subsets of themselves.
public boolean isDisjoint(FeatureFilter filt)Description copied from interface:
OptimizableFilterReturns true if this filter is disjoint from filt - that is, there is no Feature that is accepted by both filters. The empty filter is disjoint from all other filters. The all filter is disjoint from none.