Uses of Package
org.biojava.nbio.core.util

Packages that use org.biojava.nbio.core.util

Package	Description
org.biojava.nbio.core.util
org.biojava.nbio.protmod.io
org.biojava.nbio.structure.align.util
org.biojava.nbio.structure.align.xml	Serialization and deserialization for structure alignment results (as AFPChain object) to XML.
org.biojava.nbio.structure.io	Input and Output of Structures
org.biojava.nbio.structure.quaternary

Classes in org.biojava.nbio.core.util used by org.biojava.nbio.core.util

Class and Description
FlatFileCache Provides a cache for storing multiple small files in memory.
XMLWriter Simple interface for building XML documents.

Classes in org.biojava.nbio.core.util used by org.biojava.nbio.protmod.io

Class and Description
PrettyXMLWriter Implementation of XMLWriter which emits nicely formatted documents to a PrintWriter.

Classes in org.biojava.nbio.core.util used by org.biojava.nbio.structure.align.util

Class and Description
SoftHashMap A in memory cache using soft references.
XMLWriter Simple interface for building XML documents.

Classes in org.biojava.nbio.core.util used by org.biojava.nbio.structure.align.xml

Class and Description
PrettyXMLWriter Implementation of XMLWriter which emits nicely formatted documents to a PrintWriter.

Classes in org.biojava.nbio.core.util used by org.biojava.nbio.structure.io

Class and Description
XMLWriter Simple interface for building XML documents.

Classes in org.biojava.nbio.core.util used by org.biojava.nbio.structure.quaternary

Class and Description
PrettyXMLWriter Implementation of XMLWriter which emits nicely formatted documents to a PrintWriter.