| Interface | Description |
|---|---|
| QuatSymmetrySolver |
| Class | Description |
|---|---|
| AxisAligner | |
| C2RotationSolver | |
| ChainClusterer |
Wraps a sequence clustering with structural information
|
| ClusterMerger |
Merges clusters based on their sequence identity.
|
| ClusterProteinChains |
Clusters the chains of one or two structures by sequence.
|
| HelicalRepeatUnit | |
| Helix | |
| HelixAxisAligner | |
| HelixExtender | |
| HelixLayers | |
| HelixSolver | |
| PairwiseAlignment | |
| PermutationGroup | |
| ProteinChainExtractor |
Extracts information about all the chains in a structure, including
chain Ids, sequences, and atoms.
|
| ProteinSequenceClusterer |
Represents a set of non-identical protein sequences.
|
| QuatSuperpositionScorer | |
| QuatSymmetryDetector |
Detects global and local quaternary protein structure symmetry in a structure.
|
| QuatSymmetryParameters | |
| QuatSymmetryResults |
Holds the results of quaternary symmetry perception.
|
| QuatSymmetryScores | |
| Rotation | |
| RotationAxisAligner | |
| RotationGroup | |
| RotationSolver | |
| SequenceAlignmentCluster |
Represents a cluster of equivalent sequences
|
| SubunitGraph | |
| Subunits |
A bean to represent info about the set of subunits being considered for a
QuatSymmetryDetector alignment.
|
| SystematicSolver | |
| UniqueSequenceList |
Bean for a single sequence.
|
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