Uses of Package
org.biojava.nbio.structure.gui

Packages that use org.biojava.nbio.structure.gui

Package	Description
org.biojava.nbio.structure.align.gui
org.biojava.nbio.structure.gui	A few convenience classes to view protein structures with Jmol (if it is on the classpath), to calculate a protein structure alignment and to investigate the internals of the protein structure alignment algorithm.
org.biojava.nbio.structure.gui.events	Some event classes for the protein structure GUIs.
org.biojava.nbio.structure.gui.util	Some utility classes for the protein structure GUIs.

Classes in org.biojava.nbio.structure.gui used by org.biojava.nbio.structure.align.gui

Class and Description
ScaleableMatrixPanel A JPanel that can display the underlying distance matrix data of the protein structure alignment algorithm.

Classes in org.biojava.nbio.structure.gui used by org.biojava.nbio.structure.gui

Class and Description
JMatrixPanel a JPanel that can display a difference of distance matrix and paths that have been taken for the alignment Note: This panel displays the transpose of its underlying matrix.
RenderStyle
Selection
StructureViewer

Classes in org.biojava.nbio.structure.gui used by org.biojava.nbio.structure.gui.events

Class and Description
BiojavaJmol A class that provides a simple GUI for Jmol

Classes in org.biojava.nbio.structure.gui used by org.biojava.nbio.structure.gui.util

Class and Description
SequenceDisplay A sequence display that can show the results of a protein structure alignment.