Uses of Interface
org.biojava.utils.ParseErrorListener
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Packages that use ParseErrorListener Package Description org.biojava.bio.program.phred Parser for Phred outputorg.biojava.bio.seq.io Classes and interfaces for processing and producing flat-file representations of sequences.org.biojava.utils Miscellaneous utility classes used by other BioJava components. -
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Uses of ParseErrorListener in org.biojava.bio.program.phred
Classes in org.biojava.bio.program.phred that implement ParseErrorListener Modifier and Type Class Description class
PhredFormat
Format object representing Phred Quality files.Methods in org.biojava.bio.program.phred with parameters of type ParseErrorListener Modifier and Type Method Description void
PhredFormat. addParseErrorListener(ParseErrorListener theListener)
Adds a parse error listener to the list of listeners if it isn't already included.void
PhredFormat. removeParseErrorListener(ParseErrorListener theListener)
Removes a parse error listener from the list of listeners if it is included. -
Uses of ParseErrorListener in org.biojava.bio.seq.io
Classes in org.biojava.bio.seq.io that implement ParseErrorListener Modifier and Type Class Description class
EmblLikeFormat
Deprecated.Use org.biojavax.bio.seq.io.EMBLFormat insteadclass
FastaFormat
Deprecated.Use org.biojavax.bio.seq.io.FastaFormatclass
GenbankFormat
Deprecated.Use org.biojavax.bio.seq.io.GenbankFormatclass
GenbankXmlFormat
Deprecated.Use org.biojavax.bio.seq.io.INSDseqFormatclass
GenpeptFormat
Deprecated.Use org.biojavax.bio.seq.io framework insteadclass
StreamReader
Parses a stream into sequences.Methods in org.biojava.bio.seq.io with parameters of type ParseErrorListener Modifier and Type Method Description void
EmblLikeFormat. addParseErrorListener(ParseErrorListener theListener)
Deprecated.Adds a parse error listener to the list of listeners if it isn't already included.void
EmblProcessor. addParseErrorListener(ParseErrorListener theListener)
Deprecated.Adds a parse error listener to the list of listeners if it isn't already included.void
FastaFormat. addParseErrorListener(ParseErrorListener theListener)
Deprecated.Adds a parse error listener to the list of listeners if it isn't already included.void
GenbankFormat. addParseErrorListener(ParseErrorListener theListener)
Deprecated.Adds a parse error listener to the list of listeners if it isn't already included.void
GenbankProcessor. addParseErrorListener(ParseErrorListener theListener)
Deprecated.Adds a parse error listener to the list of listeners if it isn't already included.void
SwissprotProcessor. addParseErrorListener(ParseErrorListener theListener)
Deprecated.Adds a parse error listener to the list of listeners if it isn't already included.void
EmblLikeFormat. removeParseErrorListener(ParseErrorListener theListener)
Deprecated.Removes a parse error listener from the list of listeners if it is included.void
EmblProcessor. removeParseErrorListener(ParseErrorListener theListener)
Deprecated.Removes a parse error listener from the list of listeners if it is included.void
FastaFormat. removeParseErrorListener(ParseErrorListener theListener)
Deprecated.Removes a parse error listener from the list of listeners if it is included.void
GenbankFormat. removeParseErrorListener(ParseErrorListener theListener)
Deprecated.Removes a parse error listener from the list of listeners if it is included.void
GenbankProcessor. removeParseErrorListener(ParseErrorListener theListener)
Deprecated.Removes a parse error listener from the list of listeners if it is included.void
SwissprotProcessor. removeParseErrorListener(ParseErrorListener theListener)
Deprecated.Removes a parse error listener from the list of listeners if it is included. -
Uses of ParseErrorListener in org.biojava.utils
Methods in org.biojava.utils with parameters of type ParseErrorListener Modifier and Type Method Description void
ParseErrorSource. addParseErrorListener(ParseErrorListener theListener)
Adds a parse error listener to the list of listeners.void
ParseErrorSource. removeParseErrorListener(ParseErrorListener theListener)
Removes a parse error listener from the list of listeners.
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