Hierarchy For Package org.biojava.nbio.core.sequence.io

Package Hierarchies:

• All Packages

Class Hierarchy

• java.lang.Object
  • org.biojava.nbio.core.sequence.io.DNASequenceCreator (implements org.biojava.nbio.core.sequence.io.template.SequenceCreatorInterface<C>)
  • org.biojava.nbio.core.sequence.io.FastaGeneWriter
  • org.biojava.nbio.core.sequence.io.FastaReader<S,C>
  • org.biojava.nbio.core.sequence.io.FastaReaderHelper
  • org.biojava.nbio.core.sequence.io.FastaSequenceParser (implements org.biojava.nbio.core.sequence.io.template.SequenceParserInterface)
  • org.biojava.nbio.core.sequence.io.FastaWriter<S,C>
  • org.biojava.nbio.core.sequence.io.FastaWriterHelper
  • org.biojava.nbio.core.sequence.io.FileProxyDNASequenceCreator (implements org.biojava.nbio.core.sequence.io.template.SequenceCreatorInterface<C>)
  • org.biojava.nbio.core.sequence.io.FileProxyProteinSequenceCreator (implements org.biojava.nbio.core.sequence.io.template.SequenceCreatorInterface<C>)
  • org.biojava.nbio.core.sequence.io.FileProxyRNASequenceCreator (implements org.biojava.nbio.core.sequence.io.template.SequenceCreatorInterface<C>)
  • org.biojava.nbio.core.sequence.io.GenbankReader<S,C>
  • org.biojava.nbio.core.sequence.io.GenbankReaderHelper
  • org.biojava.nbio.core.sequence.io.GenbankSequenceParser<S,C> (implements org.biojava.nbio.core.sequence.io.template.SequenceParserInterface)
  • org.biojava.nbio.core.sequence.io.GenbankWriter<S,C>
  • org.biojava.nbio.core.sequence.io.GenbankWriterHelper
  • org.biojava.nbio.core.sequence.io.GenericFastaHeaderFormat<S,C> (implements org.biojava.nbio.core.sequence.io.template.FastaHeaderFormatInterface<S,C>)
  • org.biojava.nbio.core.sequence.io.GenericFastaHeaderParser<S,C> (implements org.biojava.nbio.core.sequence.io.template.SequenceHeaderParserInterface<S,C>)
  • org.biojava.nbio.core.sequence.io.GenericGenbankHeaderParser<S,C> (implements org.biojava.nbio.core.sequence.io.template.SequenceHeaderParserInterface<S,C>)
  • org.biojava.nbio.core.sequence.io.GenericInsdcHeaderFormat<S,C>
    • org.biojava.nbio.core.sequence.io.GenericGenbankHeaderFormat<S,C> (implements org.biojava.nbio.core.sequence.io.template.GenbankHeaderFormatInterface<S,C>)
  • org.biojava.nbio.core.sequence.io.IUPACParser
  • org.biojava.nbio.core.sequence.io.IUPACParser.IUPACTable (implements org.biojava.nbio.core.sequence.transcription.Table)
  • org.biojava.nbio.core.sequence.io.PlainFastaHeaderParser<S,C> (implements org.biojava.nbio.core.sequence.io.template.SequenceHeaderParserInterface<S,C>)
  • org.biojava.nbio.core.sequence.io.ProteinSequenceCreator (implements org.biojava.nbio.core.sequence.io.template.SequenceCreatorInterface<C>)
    • org.biojava.nbio.core.sequence.io.CasePreservingProteinSequenceCreator
  • java.io.Reader (implements java.io.Closeable, java.lang.Readable)
    • org.biojava.nbio.core.sequence.io.BufferedReaderBytesRead
  • org.biojava.nbio.core.sequence.io.RNASequenceCreator (implements org.biojava.nbio.core.sequence.io.template.SequenceCreatorInterface<C>)