Hierarchy For Package org.biojava.bio.seq.db

Package Hierarchies:

• All Packages

Class Hierarchy

• java.lang.Object
  • org.biojava.utils.AbstractChangeable (implements org.biojava.utils.Changeable)
    • org.biojava.bio.seq.db.AbstractSequenceDB (implements org.biojava.bio.seq.db.SequenceDB)
      • org.biojava.bio.seq.db.AnnotatedSequenceDB (implements org.biojava.bio.seq.db.SequenceDB, java.io.Serializable)
      • org.biojava.bio.seq.db.DummySequenceDB (implements org.biojava.bio.seq.db.SequenceDB)
      • org.biojava.bio.seq.db.HashSequenceDB (implements org.biojava.bio.seq.db.SequenceDB, java.io.Serializable)
      • org.biojava.bio.seq.db.IndexedSequenceDB (implements org.biojava.bio.seq.db.SequenceDB, java.io.Serializable)
      • org.biojava.bio.seq.db.SequenceDBWrapper (implements java.io.Serializable)
        • org.biojava.bio.seq.db.CachingSequenceDB
        • org.biojava.bio.seq.db.SubSequenceDB
        • org.biojava.bio.seq.db.ViewingSequenceDB
    • org.biojava.bio.seq.db.WebSequenceDB (implements org.biojava.bio.seq.db.SequenceDBLite)
      • org.biojava.bio.seq.db.NCBISequenceDB
  • org.biojava.bio.seq.db.BioIndex (implements org.biojava.bio.seq.db.IndexStore)
  • org.biojava.utils.ChangeForwarder (implements org.biojava.utils.ChangeListener)
    • org.biojava.bio.seq.db.SequenceDBWrapper.SequencesForwarder
  • org.biojava.bio.seq.db.DummySequenceDBInstallation (implements org.biojava.bio.seq.db.SequenceDBInstallation)
  • org.biojava.bio.seq.db.EmblCDROMIndexStore (implements org.biojava.bio.seq.db.IndexStore)
  • org.biojava.bio.seq.db.FetchURL
  • org.biojava.bio.seq.db.GenbankSequenceDB
  • org.biojava.bio.seq.db.GenpeptSequenceDB
  • org.biojava.bio.seq.db.IDMaker.ByName (implements org.biojava.bio.seq.db.IDMaker, java.io.Serializable)
  • org.biojava.bio.seq.db.IDMaker.ByURN (implements org.biojava.bio.seq.db.IDMaker, java.io.Serializable)
  • org.biojava.bio.seq.db.SimpleIndex (implements org.biojava.bio.seq.db.Index)
  • org.biojava.bio.seq.db.SimpleSequenceDBInstallation (implements org.biojava.bio.seq.db.SequenceDBInstallation)
  • org.biojava.bio.seq.db.SwissprotSequenceDB
  • org.biojava.bio.seq.db.TabIndexStore (implements org.biojava.bio.seq.db.IndexStore, java.io.Serializable)
  • java.lang.Throwable (implements java.io.Serializable)
    • java.lang.Exception
      • org.biojava.bio.BioException
        • org.biojava.bio.seq.db.IllegalIDException

Interface Hierarchy

• org.biojava.utils.Changeable
  • org.biojava.bio.seq.db.SequenceDBLite
    • org.biojava.bio.seq.db.SequenceDB
• org.biojava.bio.seq.db.IDMaker
• org.biojava.bio.seq.db.Index
• org.biojava.bio.seq.db.IndexStore
• org.biojava.bio.seq.db.SequenceDBInstallation